Protein Alignment ems and hoxa1

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001008017.1
• Gene: hoxa1 / 493379
• XenbaseID: XB-GENE-480737
• Length: 323
• Species: Xenopus tropicalis
• Alignment Length: 130
• Identity: 43/130 - (33%)
• Similarity: 61/130 - (46%)
• Gaps: 30/130 - (23%)

  Fly   350 NPGMARDSYQLYPWLLSRH-----GRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFES 409
            :||.|    |.:.|:..:.     |:...:.|.|        :|...||.|:..||.:||..|..
 Frog   186 SPGPA----QTFDWMKVKRNPPKTGKAGEYGFAG--------QPNTARTNFTTKQLTELEKEFHF 238

  Fly   410 NQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE-------------DEKGGEGGSQRN 461
            |:|:..|.|..:|..|.|:|||||:||||||.|.|:.::|             |||..|...:.|
 Frog   239 NKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLLPISPSASTGSDEKSEELSEKSN 303

  Fly   462  461
             Frog   304  303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	27/55 (49%)
hoxa1	NP_001008017.1	Homeodomain	221..274	CDD:459649	27/52 (52%)