DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ems and E5

DIOPT Version :9

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:560 Identity:191/560 - (34%)
Similarity:234/560 - (41%) Gaps:208/560 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MIPPVPT----------AAAAVMM---------PTPKQKIGFSIESIVGNDVSTAGGNSTP-DLS 48
            |:|..||          ||::..:         .:.|.|:.|||:|||| :.||   .|.| .:|
  Fly    11 MLPMAPTSPFVSSSSSVAASSTSVSASSTVSASASSKPKLAFSIDSIVG-ESST---RSAPLRVS 71

  Fly    49 GPQSPPPGERNVPGSPPQTPPATLTLIPG------------------SPPHHLMAPPAHGLPYPH 95
            ...||||...: |.||..|..:......|                  ||.....:||..|   .:
  Fly    72 VISSPPPRSES-PASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSPPNAG---GN 132

  Fly    96 PHAQQQHLQAPHPHPHLSPAQQHVLHQHLLMQQQHPGTPKSHQDIQELLQRLHHNAAMASGLSPL 160
            |.|.....::..|                   ....|.|.:      |::.|   ...|..|:.:
  Fly   133 PAAAGNTAKSGDP-------------------SSGTGNPPT------LIRPL---PLPAPNLALI 169

  Fly   161 QTRLSPETEQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISS 225
            ..|.||..    |||     |...||            .||..||..::.|....::     ::.
  Fly   170 GNRTSPNA----MAV-----RMAGPP------------HPPSQPPPFLAAQFQMAAA-----LAH 208

  Fly   226 PHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIK 290
            .|....||||||.||....|    |.|..|.:.||..|.|:.      ||||     .||.|   
  Fly   209 HHQQQQQQQQQQLPPVPTGP----PHGPHPHLPPGQIPLGIF------PGGP-----HPGHP--- 255

  Fly   291 ALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMAR 355
              ||:         .|:|.                             |..||         :.|
  Fly   256 --PPH---------GHHPF-----------------------------GSAPH---------LIR 271

  Fly   356 DSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKA 420
            |||.|||||||||||||| ||||:||..|||||||:||||||:||||||||||.|.||||||||.
  Fly   272 DSYPLYPWLLSRHGRIFP-RFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQ 335

  Fly   421 LAQNLNLSETQVKVWFQNRRTKHKRMQQE-----DEK--------GGEGGSQRN--MHNGS---- 466
            |||.|:|:|||||||||||||||||||||     |.|        ||.||...:  .|:||    
  Fly   336 LAQGLSLTETQVKVWFQNRRTKHKRMQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQHSY 400

  Fly   467 ------------GDEDDDELIDM-----EMDECPSDEEHE 489
                        .::|:||:|||     |||.    |||:
  Fly   401 EDAEDPEDEDEIEEDDEDEVIDMDDYGSEMDA----EEHQ 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeobox 392..444 CDD:278475 44/51 (86%)
E5NP_524825.1 Homeobox 307..359 CDD:278475 44/51 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E1_KOG0850
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 158 1.000 Inparanoid score I4276
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 1 1.000 - - FOG0000921
OrthoInspector 1 1.000 - - mtm6489
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
87.870

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