DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ems and Dr

DIOPT Version :9

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:545 Identity:148/545 - (27%)
Similarity:196/545 - (35%) Gaps:169/545 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TKMIPPVPTAAAAVMMPTPKQKIGFSIESIVGNDVSTAGGNSTPDLSGPQSPPPGERNVPGSPPQ 66
            |...|.||.::     .||...:      |:.:..|.:|.||..::|..........|:  ||  
  Fly    17 TMTSPTVPPSS-----NTPAGNL------IITSSSSNSGSNSGSNMSSGNMTSSNLTNL--SP-- 66

  Fly    67 TPPATLTLI--PGSPPHHLMAPPAHGLPYPHPHAQQQHLQAPHPHPHLSPAQQHVLHQHLLMQQQ 129
            :.||.|..:  |.||...|:             |.||||           .|||..||....|||
  Fly    67 SHPAGLNALASPTSPSALLL-------------AHQQHL-----------LQQHQQHQQQQQQQQ 107

  Fly   130 ----------HPGTPKSHQDIQELLQRLHHNAAMASGLSPLQTRLSPE--TEQPQ--------MA 174
                      ||  |..|  :.:...|| .|.::||.|:..:.|..|.  .:.||        ..
  Fly   108 QAAALQLAAVHP--PAHH--LHKTTSRL-SNFSVASLLADTRPRTPPNQAADGPQNLTSSAATSP 167

  Fly   175 VSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQ--- 236
            :|......|.|||...|:.||....|......:...|::..:::......:..|...|||||   
  Fly   168 ISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHLLQAAHAAAAAHAQHQAMAAQLRQQQQQADA 232

  Fly   237 ---QPPPNYPKPAMMHPGGA--GPMMMPGMPPAGLVRPFPMGP---------------------- 274
               .||.:........|.|:  |........||...|..|:|.                      
  Fly   233 RANSPPASTSSTPSSTPLGSALGSQGNVASTPAKNERHSPLGSHTDSELEYDEEMLQDHEADHDE 297

  Fly   275 -----------GGPPMPQGQP-GLPDI-KAL-PPYINAPPELPPQHNPHLIAAAQFQMAAALQAG 325
                       .....|:..| ||... |:| .|:  .||  |..|....|.:     .|||.:|
  Fly   298 EEDSIVDIEDMNADDSPRSTPDGLDGSGKSLESPH--GPP--PGSHMQSTILS-----PAALASG 353

  Fly   326 HV-LGP----AAAAAAAA------GLP-PHAAQFMP--NPGMARDSYQLYPWLLSRHGRIFPHRF 376
            || :.|    |.||||.|      |:| |...|..|  .|||                      |
  Fly   354 HVPIRPTPFSALAAAAVAWTGMGGGVPWPGTRQMPPFGPPGM----------------------F 396

  Fly   377 PGSFLVPPFRKPKRI-------------RTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLS 428
            ||:.......:|.||             ||.|:..|||.||..|...||:..|||...:.:|.|:
  Fly   397 PGAGFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLT 461

  Fly   429 ETQVKVWFQNRRTKHKRMQQ-EDEK 452
            |||||:||||||.|.||:|: |.||
  Fly   462 ETQVKIWFQNRRAKAKRLQEAEIEK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeobox 392..444 CDD:278475 28/51 (55%)
DrNP_477324.1 Homeobox 424..477 CDD:278475 28/52 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 1 0.900 - - E1_KOG0850
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I4021
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.870

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