Protein Alignment ems and gsx1

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001012251.1
• Gene: gsx1 / 449875
• ZFINID: ZDB-GENE-041008-135
• Length: 243
• Species: Danio rerio
• Alignment Length: 238
• Identity: 71/238 - (29%)
• Similarity: 99/238 - (41%)
• Gaps: 60/238 - (25%)

  Fly   297 NAPPELP----PQHNPHLIAAAQFQMAAALQAGHVL------------GPAAAAAAAAGLPPHAA 345
            |:||..|    |.|..|.::|..   ..:.:||.:.            .|.|.....|..|....
Zfish    22 NSPPLFPYAVHPSHPLHSLSAGS---CHSRKAGLLCFCPLCVTSQLHPSPPALPLIKASFPAFGT 83

  Fly   346 QFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRK---------------PKRIRTAF 395
            |:. :..::|.........|:....::...:|    ||..|:               .||:||||
Zfish    84 QYC-HSALSRQHSTSSGVNLNSGSGLYQAAYP----VPDPRQFHCISIENSSSQLQSSKRMRTAF 143

  Fly   396 SPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQR 460
            :.:|||:||..|.||.|:....|..:|..|||||.|||:||||||.|||       |.|:.||.|
Zfish   144 TSTQLLELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHK-------KEGKSGSHR 201

  Fly   461 -NMHN---------GSGDEDDDELIDMEMDECPSDEEHELDAS 493
             ..||         ....|::|   |:.|.. ||.|:.:.|.|
Zfish   202 TGAHNCKCSSSLSSARCSEEED---DLPMSP-PSSEKEDADLS 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	33/55 (60%)
gsx1	NP_001012251.1	Homeodomain	137..193	CDD:459649	34/62 (55%)