Protein Alignment ems and hoxc8

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001006787.1
• Gene: hoxc8 / 448482
• XenbaseID: XB-GENE-480999
• Length: 242
• Species: Xenopus tropicalis
• Alignment Length: 218
• Identity: 49/218 - (22%)
• Similarity: 80/218 - (36%)
• Gaps: 53/218 - (24%)

  Fly   315 QFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFM--PNPGMARDSYQLYPWLLSRHGRIFPHRFP 377
            :|..:.:.....|.||:|.|........|..:|.  .:..::...:|..|..|:.||.  ..:|.
 Frog    27 RFPQSVSRSHALVYGPSATAPGFQHPSHHVQEFFHHGSSSLSNSGFQQNPCALTCHGD--ASKFY 89

  Fly   378 GSFLVP--------------------------------------------PFRKP-----KRIRT 393
            |...:|                                            |:.:|     :..|.
 Frog    90 GYEALPRQSLYGAQQEASVVQYPDCKSSSNTNTSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQ 154

  Fly   394 AFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGS 458
            .:|..|.|:||..|..|.|:....|..::..|.|:|.|||:||||||.|.|:...:|:..|....
 Frog   155 TYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDE 219

  Fly   459 QRNMHNGSGDEDDDELIDMEMDE 481
            ::....|:.:|:.:|....|..|
 Frog   220 EKTEEEGNEEEEKEEEESKESKE 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	23/55 (42%)
hoxc8	NP_001006787.1	Homeodomain	150..206	CDD:459649	23/55 (42%)