Protein Alignment ems and HHEX

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Alignment Length: 340
• Identity: 88/340 - (25%)
• Similarity: 119/340 - (35%)
• Gaps: 118/340 - (34%)

  Fly   212 SSQPSSSPTLLISSPHA-TPPQ------QQQQQPPPNYPKPA-----MMHPGGAGPMMMPGMPPA 264
            |||...:.|..|::||| ..|:      .....|.|: |..|     :.....|....|..|..:
  Fly    33 SSQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPS-PSSATNIYDLSREAAAAQYAMKSMDSS 96

  Fly   265 GLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLG 329
            .::.|..:        :..|..||    |..:.....|..|.||.|. ...||
  Fly    97 AVLAPTSL--------RFNPIYPD----PASLFYQQVLQLQKNPSLF-MPHFQ------------ 136

  Fly   330 PAAAAAAAAGLPPHA-----------AQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFP-GSFLV 382
             |||.||||.:.|.|           .:..|||..|.             ..::.:.:| .||.:
  Fly   137 -AAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAA-------------AALYCNAYPAASFYM 187

  Fly   383 PPF---RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHK 444
            ..|   ||..:||  |:..|...||..|.|::|:...||:.||..|.|::.|||.||||||.|.:
  Fly   188 SNFGVKRKGGQIR--FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWR 250

  Fly   445 RM-----------------------------------------QQEDEKGGEGGSQRNMHNGSGD 468
            |.                                         ||.||       :..|:....|
  Fly   251 RANLSKRSASAQGPIAGAAVGSPSSASSSSVPVLNLGSGSRCGQQSDE-------EDRMYLSEDD 308

  Fly   469 EDDDELIDMEMDECP 483
            ||||| .:.|.||.|
  Fly   309 EDDDE-DEGEADETP 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	25/55 (45%)
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	24/52 (46%)