Protein Alignment ems and Scr

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 461
• Identity: 103/461 - (22%)
• Similarity: 150/461 - (32%)
• Gaps: 141/461 - (30%)

  Fly    20 PKQKIGFSIESIVGNDVSTAGGNSTPDLSGPQSPPPGERN--VPGSPPQTPPA---TLTLIPGSP 79
            |:|....:..|..|.....|||:.....||..:...|...  .||:....|.|   |..|.|.:|
  Fly    27 PQQNHPGAGNSSAGGSGGGAGGSGGVVPSGGTNGGQGSAGAATPGANDYFPAAAAYTPNLYPNTP 91

  Fly    80 PHHLMAPPAHG-------LPYP--HP-----HAQQQHLQAPHPHPHLSPAQQHVLHQHLLMQQQH 130
            ..|.....|:|       :.|.  .|     ..|||..|..|.|...:.|.|   .|..|.||||
  Fly    92 QAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQ---QQQQLAQQQH 153

  Fly   131 PGTPKSHQDIQELLQRLHHNAAMASGLSPLQTRLSPETEQPQMAVSLKRERSPAPP--------- 186
            |                                 ..:.:|.|..:|.|....|..|
  Fly   154 P---------------------------------QQQQQQQQANISCKYANDPVTPGGSGGGGVS 185

  Fly   187 -------AMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPK 244
                   :.....|.:|.:    ..|:.:|.:...|..||:.::.|...:
  Fly   186 GSNNNNNSANSNNNNSQSL----ASPQDLSTRDISPKLSPSSVVESVARS--------------- 231

  Fly   245 PAMMHPGGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPH 309
               ::.|..|..:......|||.... .|.|    ..|.||..::              |.|:|
  Fly   232 ---LNKGVLGGSLAAAAAAAGLNNNH-SGSG----VSGGPGNVNV--------------PMHSP- 273

  Fly   310 LIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPH 374
                          .|......:.:...||...::.....||.      |:|||:...|
  Fly   274 --------------GGGDSDSESDSGNEAGSSQNSGNGKKNPP------QIYPWMKRVH------ 312

  Fly   375 RFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNR 439
              .|:..|....:.||.||:::..|.|:||..|..|:|:....|..:|..|.|:|.|:|:|||||
  Fly   313 --LGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 375

  Fly   440 RTKHKR 445
            |.|.|:
  Fly   376 RMKWKK 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	25/55 (45%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	25/55 (45%)