Protein Alignment ems and pb

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Alignment Length: 333
• Identity: 87/333 - (26%)
• Similarity: 126/333 - (37%)
• Gaps: 101/333 - (30%)

  Fly   212 SSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPFPMGPGG 276
            |...:|..|.:.|.....|.|.|..|        ..:..||.|        .||:|.    |.||
  Fly     7 SLDTTSMGTQIKSESPLNPLQVQTGQ--------TSLPVGGCG--------GAGVVG----GVGG 51

  Fly   277 PPMPQGQPGLPDIKALPP-------------------------------YINAPPELPPQHNPHL 310
            ..:..||||:.. :.:||                               :||:.|.:
  Fly    52 VGVSVGQPGIGQ-QGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSM-------- 107

  Fly   311 IAAAQFQMAAALQAGHVLGPAAAAA-------------AAAGLPPHAAQFMPNPGMARDSYQLYP 362
               |:|....:.::..:..|..:.|             ...|.|.......|: ||  ||...||
  Fly   108 ---AEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPD-GM--DSVPEYP 166

  Fly   363 WL----LSRHGRIFPHRFPGSF--LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKAL 421
            |:    .||......::...|.  .||....|:|:|||::.:|||:||..|..|:|:....|..:
  Fly   167 WMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEI 231

  Fly   422 AQNLNLSETQVKVWFQNRRTKHKRM---QQEDEKGGEGGSQRNMHNGSGDEDDDELIDMEMDEC- 482
            |.:|:|:|.||||||||||.||||.   :.:||.        |..:..||:|..:........|
  Fly   232 AASLDLTERQVKVWFQNRRMKHKRQTLSKTDDED--------NKDSLKGDDDQSDSNSNSKKSCQ 288

  Fly   483 ----PSDE 486
                |||:
  Fly   289 GCELPSDD 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	29/55 (53%)
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	29/55 (53%)