DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and si:dkey-43p13.5

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_068074401.2 Gene:si:dkey-43p13.5 / 407678 ZFINID:ZDB-GENE-131121-510 Length:285 Species:Danio rerio


Alignment Length:226 Identity:61/226 - (26%)
Similarity:88/226 - (38%) Gaps:70/226 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 AGHVLGPAAAAA----AAAGLPPHAAQ------FMPNPGMARDSYQLY--------PWLLSRHGR 370
            |||::.|.:.|.    ||...|...::      |:|.|.::.:..:.|        ..||:.|  
Zfish    31 AGHLVSPLSPAVFHSPAAHFFPAFPSRLSSPQIFIPGPLLSYELLRSYLQPEPCKQSLLLAAH-- 93

  Fly   371 IFPHRFPGS------FLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSE 429
                  |.|      ...|...|.:|.|..:|..||.:||..|:|..|.....|:|||..|:|.|
Zfish    94 ------PSSGHPADNIDEPRPVKQRRARANYSSWQLEELEKTFQSTHYPDIFMREALALRLDLIE 152

  Fly   430 TQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRN--------------MHNGS----GDEDDDE--- 473
            .:|:|||||||.|.:|..:...:.||..|||:              :||.|    .|.:.|.   
Zfish   153 ARVQVWFQNRRAKMRRQLKLQIQTGEQCSQRDTDTRHPESSISNPELHNNSPSPCWDRNQDRTNP 217

  Fly   474 -----------------LIDMEMDECPSDEE 487
                             |.|.:..|.|..|:
Zfish   218 AHPKPSPSAIQSPVTDLLQDQQDSEAPGPED 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 26/55 (47%)
si:dkey-43p13.5XP_068074401.2 None

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