DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ems and hhex

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_989420.1 Gene:hhex / 395060 XenbaseID:XB-GENE-487159 Length:274 Species:Xenopus tropicalis


Alignment Length:307 Identity:80/307 - (26%)
Similarity:109/307 - (35%) Gaps:97/307 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 QSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPFPMGPG 275
            |...|||| .|.:|.|...|...|...|.|.|....:                           |
 Frog     2 QYQHPSSS-ALGLSVPLYAPTPLQPVHPTPFYIDDIL---------------------------G 38

  Fly   276 GPPMPQGQPGLPDIKALPPYINAPPELP---------------PQHNPHLIAAAQFQMAAALQAG 325
            ......|.|.||           .|.||               |.:.|..|..|           
 Frog    39 RSSASNGTPALP-----------TPTLPSPNSSFTSLVATYRTPIYEPTPIHPA----------- 81

  Fly   326 HVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPW---------LLSRHGRIFPHRFPGSFL 381
             ...|.||.||:.|...:|     ||        |||:         .|.||..:........|:
 Frog    82 -FTHPGAALAASYGASTYA-----NP--------LYPFSRPVSEYTHALIRHDTLGKPLLWSPFI 132

  Fly   382 VPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRM 446
            ..|..|.|..:..||..|.::||..||:.:|:...|||.||:.|.|||.|||.||||||.|.:|:
 Frog   133 QRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRL 197

  Fly   447 QQEDEKGGEGGSQRNMHNGSGDEDDDELIDMEMDECPSDEEHELDAS 493
            :||:.:|.:.....::.|         :.:...:.|.|.|:...::|
 Frog   198 KQENPQGNKKDETESLEN---------ICEESQERCLSAEQKSRESS 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 28/55 (51%)
hhexNP_989420.1 Homeodomain 138..196 CDD:459649 29/57 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..274 8/48 (17%)

Return to query results.
Submit another query.