Protein Alignment ems and msx2

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_002936749.1
• Gene: msx2 / 394987
• XenbaseID: XB-GENE-852974
• Length: 256
• Species: Xenopus tropicalis
• Alignment Length: 188
• Identity: 63/188 - (33%)
• Similarity: 89/188 - (47%)
• Gaps: 47/188 - (25%)

  Fly   300 PELPPQHNPHL-IAAAQFQMAAAL-------QAGHVLGPAAAAAAAAGLPPH---AAQFMPN-PG 352
            |.|.|..:..: :::..|.:.|.:       :|.|:.|  ..|:||...|.|   ..:..|: ||
 Frog    21 PTLSPSDDHKIKVSSLPFSVEALMADKRVPKEAPHLRG--VDASAAGSTPRHLHMGIRDSPSPPG 83

  Fly   353 MAR----------DSYQLYPWLLSRHGRIFPHRFPGSFLVPP---------FRKPK---RIRTAF 395
            :.:          :|.....|  |:.|        ||:..||         .||.|   :.||.|
 Frog    84 LTKTFETSSVKSENSEDGTTW--SKDG--------GSYSPPPRHLSPSTCTLRKHKTNRKPRTPF 138

  Fly   396 SPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ-EDEK 452
            :.||||.||..|...||:..|||...:.:|||:|||||:||||||.|.||:|: |.||
 Frog   139 TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAEIEK 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	31/58 (53%)
msx2	XP_002936749.1	Homeodomain	132..188	CDD:459649	30/55 (55%)