Protein Alignment ems and hoxb9

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_988879.1
• Gene: hoxb9 / 394474
• XenbaseID: XB-GENE-963094
• Length: 247
• Species: Xenopus tropicalis
• Alignment Length: 303
• Identity: 78/303 - (25%)
• Similarity: 115/303 - (37%)
• Gaps: 78/303 - (25%)

  Fly   160 LQTRLSPETEQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLIS 224
            :::.:|||:|:           :||.....|..:|.......|:.|......|.|| .:|....|
 Frog    12 VESIISPESEE-----------APAAKFSGQYPSPRPAAHSAHSEPLDFPSCSFQP-KAPVFSAS 64

  Fly   225 -SPHATPPQQQQQQPPPNYPKPAMMHP----GGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQP 284
             ||         ..|.|..|.|::.||    |...|   .|....|.:.|......|       |
 Frog    65 WSP---------LNPHPASPLPSVYHPYIQQGAPTP---EGRYLRGWLEPLQRAENG-------P 110

  Fly   285 GLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAA--AAAAAGLPPHAAQF 347
            |...:|: .|.:..|.||..      :.|.|:.:.:         |||.  |...|..|.:  :.
 Frog   111 GQGTVKS-EPLLGPPGELDK------LGAQQYNLGS---------PAAREDANERATFPDN--KL 157

  Fly   348 MPNPGMARDSYQLYP---WLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFES 409
            ....|....::|..|   ||.:|..|                   :.|..::..|.|:||..|..
 Frog   158 CEGSGDKDRTHQSNPSANWLHARSSR-------------------KKRCPYTKYQTLELEKEFLF 203

  Fly   410 NQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEK 452
            |.|:....|..:|:.|||||.|||:||||||.|.|::.::..|
 Frog   204 NMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKLNKDQSK 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	25/55 (45%)
hoxb9	NP_988879.1	Hox9_act	1..169	CDD:461369	45/205 (22%)
		Homeodomain	183..239	CDD:459649	26/74 (35%)