DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and CG34031

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster


Alignment Length:197 Identity:51/197 - (25%)
Similarity:76/197 - (38%) Gaps:66/197 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 NPHL--------------IAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDS 357
            ||||              |...:.....|.....:|..:.|.::...||......     .:.|.
  Fly     2 NPHLEQDKSRLNSCIEKSIQTKKKGKLGAFSIDSILSTSEAHSSQNSLPKDNTNV-----TSSDI 61

  Fly   358 YQLYPW----------------LLSRHGRIFPHRFPGS----------FLVPPF----------- 385
            .:||.:                |...|.|..|..|.||          .::|.:           
  Fly    62 SKLYAFSFTQEGNNKTPLTNFDLCQGHPRRLPITFDGSTVSRFVWRTESILPSYITNSTNLQEKQ 126

  Fly   386 -------RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKH 443
                   |||   |.|:|.|||.:||:.|..::|:..::|..|:::|:|:|.|||.||||||||.
  Fly   127 LRKRFTDRKP---RQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKW 188

  Fly   444 KR 445
            |:
  Fly   189 KK 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 26/55 (47%)
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 29/58 (50%)

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