DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and prrx1b

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_017207930.1 Gene:prrx1b / 337089 ZFINID:ZDB-GENE-030131-9033 Length:267 Species:Danio rerio


Alignment Length:63 Identity:30/63 - (47%)
Similarity:41/63 - (65%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ 448
            ||.:|.||.|:.|||..||..||...|.....|:.||:.:||:|.:|:|||||||.|.:|.::
Zfish    94 RKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNER 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 27/55 (49%)
prrx1bXP_017207930.1 Homeodomain 101..153 CDD:459649 25/51 (49%)
OAR 242..259 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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