DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Pph13

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster


Alignment Length:120 Identity:40/120 - (33%)
Similarity:62/120 - (51%) Gaps:20/120 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQED 450
            ||.:|.||.|:..||.:||.||:...|.....|:.||..::|:|.:|:|||||||.|.::   ::
  Fly     8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRK---QE 69

  Fly   451 EKGGEGGSQRNMHNGSGDED---DDELIDMEMD-----------ECPSDEEHELD 491
            :.||.||..:   .|:.|.|   ||..:..::|           :.|....:.||
  Fly    70 KIGGLGGDYK---EGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLD 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/55 (45%)
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 25/55 (45%)

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