Protein Alignment ems and hlx1

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001418073.1
• Gene: hlx1 / 327096
• ZFINID: ZDB-GENE-030131-5304
• Length: 357
• Species: Danio rerio
• Alignment Length: 295
• Identity: 77/295 - (26%)
• Similarity: 102/295 - (34%)
• Gaps: 94/295 - (31%)

  Fly   247 MMHPGGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPY------------INAP 299
            |.|.|....:...|.|    :||.|:             .||.:..|.|            ||||
Zfish    56 MAHIGARAQVHSSGSP----LRPSPV-------------TPDARLHPAYLRHGIHLTSRAAINAP 103

  Fly   300 P------------------ELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPP---H 343
            |                  |...:.:|.|.............|.||    :|:...|.:.|   .
Zfish   104 PPTSKDLKFGIDRILSTDFEPKSKESPSLRDLTSIVSPNRQSAVHV----SASPYFASIDPTMSE 164

  Fly   344 AAQFMPNPG-MARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPF-------------RKPKRIRTA 394
            .:..|.:.| .||.|.|              |:|..:|...|:             ||....|..
Zfish   165 TSSLMGSIGNAARQSGQ--------------HQFQDTFPGRPYAVLSKDTMPQTYKRKRSWSRAV 215

  Fly   395 FSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQ 459
            ||..|...||..||..:||...:||.||..|.|::.||||||||||.|.:..:       |..:|
Zfish   216 FSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSK-------EAQAQ 273

  Fly   460 RNMHNGSGDEDDDELIDMEMD--EC---PSDEEHE 489
            ::......|:...|....|.|  ||   ||:.|.|
Zfish   274 KDKEKEQPDKSAAETEQKERDDSECETEPSESEFE 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	27/55 (49%)
hlx1	NP_001418073.1	Homeodomain	206..266	CDD:459649	29/59 (49%)