DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and HOXD13

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_000514.2 Gene:HOXD13 / 3239 HGNCID:5136 Length:343 Species:Homo sapiens


Alignment Length:339 Identity:83/339 - (24%)
Similarity:125/339 - (36%) Gaps:80/339 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 AAMASGLSPLQTR--LSPETEQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSS 213
            ||.|||    |.|  ||    .|..|.:.....:.|..|...|...|.....|.|..::   .||
Human    33 AAAASG----QCRGFLS----APVFAGTHSGRAAAAAAAAAAAAAAASGFAYPGTSERT---GSS 86

  Fly   214 QPSSSPTLLISSPHATPPQQQQQQP--------PPNYP-------------KPAMMHPGGAGPMM 257
            ..|||..::.:.|.| ||.::...|        ||:.|             ...|.|..|.....
Human    87 SSSSSSAVVAARPEA-PPAKECPAPTPAAAAAAPPSAPALGYGYHFGNGYYSCRMSHGVGLQQNA 150

  Fly   258 MPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAAL 322
            :...|.|.|        ||.|:.:    ..|:..|     |...:|....|.......|......
Human   151 LKSSPHASL--------GGFPVEK----YMDVSGL-----ASSSVPANEVPARAKEVSFYQGYTS 198

  Fly   323 QAGHVLGPA-AAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLS--------------RHGRIF 372
            ...||.|.. ..:...:|.|.|.|.      ::.:.||  .|.|:              :....:
Human   199 PYQHVPGYIDMVSTFGSGEPRHEAY------ISMEGYQ--SWTLANGWNSQVYCTKDQPQGSHFW 255

  Fly   373 PHRFPGSF-LVPP----FRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQV 432
            ...|||.. |..|    :|:.::.|..::..||.:||:.:..|:::...:|:.::...||||.||
Human   256 KSSFPGDVALNQPDMCVYRRGRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQV 320

  Fly   433 KVWFQNRRTKHKRM 446
            .:||||||.|.|::
Human   321 TIWFQNRRVKDKKI 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 20/55 (36%)
HOXD13NP_000514.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
polyalanine repeat 57..71 3/13 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..115 11/40 (28%)
HoxA13_N <100..172 CDD:463521 17/84 (20%)
Homeodomain 277..333 CDD:459649 20/55 (36%)
Blue background indicates that the domain is not in the aligned region.

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