DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and HOXD4

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_055436.2 Gene:HOXD4 / 3233 HGNCID:5138 Length:255 Species:Homo sapiens


Alignment Length:257 Identity:70/257 - (27%)
Similarity:101/257 - (39%) Gaps:54/257 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 QPPPNYPKPAMMHP--GGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAP 299
            |||..||:|.....  ||:||.....:|..|..:. |.||||.....|:|           ..||
Human    47 QPPGLYPRPDFGEQPFGGSGPGPGSALPARGHGQE-PGGPGGHYAAPGEP-----------CPAP 99

  Fly   300 PELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWL 364
            |..||...|                    |..|.:.:....|| :...:..|.:      :|||:
Human   100 PAPPPAPLP--------------------GARAYSQSDPKQPP-SGTALKQPAV------VYPWM 137

  Fly   365 LSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSE 429
            ...|.......:.|.       :|||.|||::..|:|:||..|..|:|:....|..:|..|.|||
Human   138 KKVHVNSVNPNYTGG-------EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSE 195

  Fly   430 TQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMHNGSGDEDDDELIDMEMDECPSDEEHELD 491
            .|:|:||||||.|.|:..:.....|...|..:..:.|......:.:.      |..::|..|
Human   196 RQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSSSCSSSVAPSQHLQ------PMAKDHHTD 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 27/55 (49%)
HOXD4NP_055436.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..127 29/112 (26%)
Antp-type hexapeptide 133..138 3/4 (75%)
Homeodomain 155..211 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..255 6/46 (13%)

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