DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and HOXC12

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_776272.1 Gene:HOXC12 / 3228 HGNCID:5124 Length:282 Species:Homo sapiens


Alignment Length:276 Identity:71/276 - (25%)
Similarity:97/276 - (35%) Gaps:82/276 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 PQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAG----LVR-- 268
            |..|.|.......:|.|.|        :|...||:|.:..|....       ||.|    |.|  
Human    40 PSLSYPRRDNVCSLSWPSA--------EPCNGYPQPYLGSPVSLN-------PPFGRTCELARVE 89

  Fly   269 --------PFPMGPGGPPMPQGQ---PGL-PDIKALPPYINAPPEL------------------- 302
                    |...|.||....:.:   ||. |....||...:.||.|                   
Human    90 DGKGYYREPCAEGGGGGLKREERGRDPGAGPGAALLPLEPSGPPALGFKYDYAAGGGGGDGGGGA 154

  Fly   303 -PPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPH-AAQFMPNPGMARDSYQLYPWLL 365
             ||...|...:......::.|..|:       ..|.||.|.. .:...|..|::......|| :.
Human   155 GPPHDPPSCQSLESDSSSSLLNEGN-------KGAGAGDPGSLVSPLNPGGGLSASGAPWYP-IN 211

  Fly   366 SRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSET 430
            ||..:              .|||      :|..||.:||..|..|:::....|:.|:..||||:.
Human   212 SRSRK--------------KRKP------YSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQ 256

  Fly   431 QVKVWFQNRRTKHKRM 446
            |||:||||||.|.||:
Human   257 QVKIWFQNRRMKKKRL 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 23/55 (42%)
HOXC12NP_776272.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..129 9/34 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..214 14/74 (19%)
Homeodomain 215..271 CDD:459649 26/75 (35%)

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