DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and HOXA11

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_005514.1 Gene:HOXA11 / 3207 HGNCID:5101 Length:313 Species:Homo sapiens


Alignment Length:296 Identity:67/296 - (22%)
Similarity:106/296 - (35%) Gaps:74/296 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 QPPHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPN----YPKPAMMH------PGGA 253
            |.|.:.|.:.|..|:.|...|...::..........:..|..|    |....::|      |..|
Human    36 QTPSSRPMTYSYSSNLPQVQPVREVTFREYAIEPATKWHPRGNLAHCYSAEELVHRDCLQAPSAA 100

  Fly   254 GPMMMPG------------MPPAGLVRPF--PMGPGGPPMPQG-------QPGLPDIKALPPYIN 297
            |   :||            .|...:...|  .:|..| .:||.       ..|.|:..|...|  
Human   101 G---VPGDVLAKSSANVYHHPTPAVSSNFYSTVGRNG-VLPQAFDQFFETAYGTPENLASSDY-- 159

  Fly   298 APPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYP 362
             |.:...:..|....|..               |||||||.|.|..::......|..|::.....
Human   160 -PGDKSAEKGPPAATATS---------------AAAAAAATGAPATSSSDSGGGGGCRETAAAAE 208

  Fly   363 WLLSRHGRIFPHRFPGSFLVPPF--------------RKPKRIRTAFSPSQLLKLEHAFESNQYV 413
            ....|       |.|.|...|..              ::.::.|..::..|:.:||..|..:.|:
Human   209 EKERR-------RRPESSSSPESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYI 266

  Fly   414 VGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
            ...:|..|::.|||::.|||:||||||.|.|::.::
Human   267 NKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKINRD 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 21/55 (38%)
HOXA11NP_005514.1 DUF3528 25..153 CDD:432284 24/120 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..246 21/116 (18%)
Homeodomain 242..298 CDD:459649 21/55 (38%)

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