DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ems and TLX1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_011538046.1 Gene:TLX1 / 3195 HGNCID:5056 Length:342 Species:Homo sapiens


Alignment Length:230 Identity:72/230 - (31%)
Similarity:95/230 - (41%) Gaps:38/230 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 GGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQ 315
            ||.|.....|...||...  ..|||||..|.|..|...:..|....|....|.....|.....:.
Human    58 GGGGSAAATGAGGAGAYG--TGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSS 120

  Fly   316 FQMAAALQAGHVLGPA----AAAAA-----AAGLPPHAAQFMPN----PGMARDSYQLYPWLLSR 367
            ....|...||.:..||    |.|.|     |.|||.     :|:    ||:...:...:||:.|.
Human   121 GGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPT-----VPSVPAMPGVNNLTGLTFPWMESN 180

  Fly   368 HGRIFPHRF---------------PGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAE 417
            . |....||               |.....||  |.|:.||:|:..|:.:||..|...:|:..||
Human   181 R-RYTKDRFTVALSPFTVTRRIGHPYQNRTPP--KKKKPRTSFTRLQICELEKRFHRQKYLASAE 242

  Fly   418 RKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEK 452
            |.|||:.|.:::.|||.||||||||.:|...|:.:
Human   243 RAALAKALKMTDAQVKTWFQNRRTKWRRQTAEERE 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 27/55 (49%)
TLX1XP_011538046.1 Homeodomain 214..270 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.