DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and CG11294

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster


Alignment Length:133 Identity:41/133 - (30%)
Similarity:59/133 - (44%) Gaps:32/133 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 PGSFLVPPF---RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQN 438
            ||..|....   |:.:|.||.|:|.||.:||..|:...|.....|:.:|..::|||.:|:|||||
  Fly    10 PGDLLTEYMFGRRRQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQN 74

  Fly   439 RRTKHK---RMQQEDEK---------------GG--EGGS---------QRNMHNGSGDEDDDEL 474
            ||.|.:   |:|...:.               ||  :|||         .:...|.|....|.||
  Fly    75 RRAKWRKQARLQLLQDAWRMRCLSLGTPPVMGGGAVQGGSGNGATARPPSQTPENLSSASKDSEL 139

  Fly   475 IDM 477
            .::
  Fly   140 AEV 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/58 (43%)
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 23/51 (45%)

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