Protein Alignment ems and vnd

DIOPT Version :9

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Alignment Length: 543
• Identity: 129/543 - (23%)
• Similarity: 185/543 - (34%)
• Gaps: 157/543 - (28%)

  Fly     4 MIPP-----VPTA--AAAVMMPTP---------KQKIGFSIESIV---GNDV------STAGGNS 43
            ::||     :|.|  .||:....|         .|:.||.|..|:   |:::      :.|..:.
  Fly   162 LLPPWNHALLPAAFYPAALRNALPGLFDAKVPSSQRSGFHISDILNLEGSELKNAAAAAAAAAHH 226

  Fly    44 TPDLS--GPQSPPPGERNVPGSPPQTPPATLTLIP------------------GSPPHHLM---- 84
            ..|||  .......|.|   |....|.|:.|:..|                  |...||..
  Fly   227 GSDLSHHSASESTSGHR---GQGSHTSPSALSPTPAGVSADEHHNGSGTGGGAGEADHHSTTEHH 288

  Fly    85 APPAHGLPYPHPHAQQQHLQAPHPHPHLSPAQQHVLHQH----LLMQQQHPGTPKSHQDIQELLQ 145
            |||:|. ...|||.||.|      ||||...|||  ||.    |.:.....|..:||........
  Fly   289 APPSHP-QQQHPHHQQHH------HPHLLLPQQH--HQQAVAPLPLAHHQSGEAQSHAHANAAAA 344

  Fly   146 RL--HHNAAMASGLSPLQTRLS-PETEQPQMAVSLKRERSPAPPAMEQA-------ENPAQRIQP 200
            .|  .||||.|:.::..|...: |:.........:......|...::.:       ||.....|.
  Fly   345 HLLASHNAAAAAAVAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQ 409

  Fly   201 PHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAG 265
            | ..|.|.||.:|:.|.  |.:.|:...:|......:   :|.:.|.......|..:......:|
  Fly   410 P-ASPDSTSPVTSEVSY--TYIGSNCQTSPALSGDYK---SYSRSADSDALSVGDALHTLHGSSG 468

  Fly   266 LVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGH---- 326
                  .|..|        |.|...||....|.    ...:|.|.:.|.....|.   :||
  Fly   469 ------NGSAG--------GAPTAHALHNNNNN----TTNNNNHSLKAEGINGAG---SGHDDSL 512

  Fly   327 -------VLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPP 384
                   .:.....|..:.|...:.:..:||
  Fly   513 NEDGIEEDIDDVDDADGSGGGDANGSDGLPN---------------------------------- 543

  Fly   385 FRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
             :|.|| |..|:.:|..:||..|...:|:...||:.||..:.|:.||||:||||.|.|.||.|
  Fly   544 -KKRKR-RVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQ-- 604

  Fly   450 DEKGGEG------GSQRNMHNGS 466
            :|||.||      |...:.|:.|
  Fly   605 NEKGYEGHPGLLHGHATHPHHPS 627

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeobox	392..444	CDD:278475	22/51 (43%)
vnd	NP_476786.2	Homeobox	548..601	CDD:278475	23/53 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24340
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	3.010