DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Nkx2-3

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001101064.1 Gene:Nkx2-3 / 309389 RGDID:1308521 Length:362 Species:Rattus norvegicus


Alignment Length:67 Identity:30/67 - (44%)
Similarity:44/67 - (65%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 PPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQ 447
            |..|..::.|..||.:|:.:||..|:..:|:...||:.||.:|.|:.||||:||||||.|.||.:
  Rat   140 PKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQR 204

  Fly   448 QE 449
            |:
  Rat   205 QD 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/55 (45%)
Nkx2-3NP_001101064.1 Homeodomain 146..202 CDD:459649 25/55 (45%)

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