DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and nkx2.3

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_571498.1 Gene:nkx2.3 / 30698 ZFINID:ZDB-GENE-990415-178 Length:321 Species:Danio rerio


Alignment Length:64 Identity:31/64 - (48%)
Similarity:42/64 - (65%) Gaps:3/64 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
            |||   |..||.:|:.:||..|:..:|:...||:.||..|.|:.||||:||||||.|.||.:|:
Zfish   143 RKP---RVLFSQAQVFELERRFKQQRYLSAPEREHLASTLKLTSTQVKIWFQNRRYKCKRQRQD 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/55 (45%)
nkx2.3NP_571498.1 Homeodomain 143..199 CDD:459649 28/58 (48%)

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