Protein Alignment ems and vsx1

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_571408.1
• Gene: vsx1 / 30598
• ZFINID: ZDB-GENE-990415-205
• Length: 344
• Species: Danio rerio
• Alignment Length: 202
• Identity: 53/202 - (26%)
• Similarity: 74/202 - (36%)
• Gaps: 59/202 - (29%)

  Fly   267 VRPFPMGPGGPPMPQGQ---------PGLPDIKALPPYI--------NAPPELP---PQHNPHLI 311
            ::|...|||..|..:||         ||    .:||..:        ..||..|   |.|.|.|.
Zfish    49 LQPHQSGPGAGPNGEGQSAAVGGFSFPG----GSLPLGLGFLCSLAAQQPPGAPCFLPSHIPLLQ 109

  Fly   312 AAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRF 376
            :..:                             :.||.|....||.|.....|   .|.....:.
Zfish   110 SRTE-----------------------------SHFMQNLEQQRDVYSDDDCL---SGDRNDGKN 142

  Fly   377 PGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRT 441
            .|:   ...||.:|.||.|:..||.:||.||....|.....|:.||....|.|.:::|||||||.
Zfish   143 SGN---SQKRKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRA 204

  Fly   442 KHKRMQQ 448
            |.::.::
Zfish   205 KWRKREK 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
vsx1	NP_571408.1	Octapeptide motif	37..44
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	49..70		7/20 (35%)
		COG5576	101..>221	CDD:227863	39/146 (27%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	127..156		7/34 (21%)
		Nuclear localization signal. /evidence=ECO:0000269|PubMed:11331779	147..151		1/3 (33%)
		Homeodomain	152..208	CDD:459649	24/55 (44%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	273..344