DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and dlx1a

DIOPT Version :9

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_571380.1 Gene:dlx1a / 30568 ZFINID:ZDB-GENE-990415-48 Length:252 Species:Danio rerio


Alignment Length:226 Identity:56/226 - (24%)
Similarity:86/226 - (38%) Gaps:71/226 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 IKALPPYINAPPE--------LPP--QHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPH 343
            :..:|..:|:|..        .||  |.:|..:....:.|.....:||              |.|
Zfish     3 MSTIPESLNSPVSGKSVFMEFGPPSQQMSPSSMTHGHYSMHCLHSSGH--------------PQH 53

  Fly   344 AAQFMPNPGMARD----------SYQLYPWLLSRHGRIFPH------------------------ 374
            .:.:.|.|...|.          |:...|:|.:  .:.:|:                        
Zfish    54 DSAYSPAPSFPRSLPYPYVNSVGSHSSSPYLST--VQTYPNNSALAQTRLEDPAPESEKNTVVEG 116

  Fly   375 ---RFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWF 436
               ||.|.  ....|||   ||.:|..||..|...|:..||:...||..||.:|.|::||||:||
Zfish   117 GEVRFNGK--GKKIRKP---RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWF 176

  Fly   437 QNRRTKHKRMQQEDEKGGEGGSQRNMHNGSG 467
            ||:|:|.|::.::   ||.......:.||.|
Zfish   177 QNKRSKFKKLMKQ---GGGTIDTNALANGRG 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeobox 392..444 CDD:278475 25/51 (49%)
dlx1aNP_571380.1 COG5576 <124..233 CDD:227863 34/89 (38%)
Homeobox 131..184 CDD:278475 26/55 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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