DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and msx3

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_571347.2 Gene:msx3 / 30526 ZFINID:ZDB-GENE-980526-306 Length:273 Species:Danio rerio


Alignment Length:65 Identity:36/65 - (55%)
Similarity:45/65 - (69%) Gaps:3/65 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQED 450
            |||   ||.|:.||||.||..|...||:..|||...:.:|||:|||||:||||||.|.||:|:.:
Zfish   152 RKP---RTPFTTSQLLALERKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQEAE 213

  Fly   451  450
            Zfish   214  213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 30/55 (55%)
msx3NP_571347.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..159 5/9 (56%)
Homeodomain 152..208 CDD:459649 33/58 (57%)

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