DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and rx2

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_571301.2 Gene:rx2 / 30473 ZFINID:ZDB-GENE-990415-237 Length:327 Species:Danio rerio


Alignment Length:67 Identity:31/67 - (46%)
Similarity:43/67 - (64%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 PFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ 448
            |.:|.:|.||.|:..||.:||.|||.:.|.....|:.||..:||.|.:|:|||||||.|.:|.::
Zfish   131 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEK 195

  Fly   449 ED 450
            .|
Zfish   196 MD 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 27/55 (49%)
rx2NP_571301.2 Octapeptide motif 37..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..73
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..139 3/7 (43%)
Homeodomain 136..192 CDD:459649 27/55 (49%)
OAR 302..316 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 304..317
Nuclear localization signal. /evidence=ECO:0000255 310..314
Blue background indicates that the domain is not in the aligned region.

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