DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ems and dbx1b

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_571253.1 Gene:dbx1b / 30416 ZFINID:ZDB-GENE-000128-11 Length:322 Species:Danio rerio


Alignment Length:375 Identity:88/375 - (23%)
Similarity:130/375 - (34%) Gaps:141/375 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 PETEQPQMAVSLKRERSPAPPAMEQA---------ENPAQRIQPPHTPPKSV-SPQSSQPSSSPT 220
            |...:|..|:||       |||::.|         |:..:..:|.....:|: ||.:|.|::..|
Zfish    14 PSFLRPSSALSL-------PPALQSAFTTHSSFLVEDLLRISRPAAFMHRSIPSPSASPPATGVT 71

  Fly   221 LLISSPHA------TPPQQQQQQP------PPNYPKPAMMHPGGAGPMM-------MPGMPPAGL 266
            .|.::..|      |...::...|      .|||.|      .|...::       .|..|..|:
Zfish    72 TLNTTSSAVHVAMSTALAKRSSSPQTSISSDPNYLK------FGVNAILASTTRNASPPPPVQGM 130

  Fly   267 ---VRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVL 328
               ..|||...|               :..|:|.               |:.|            
Zfish   131 NAKTFPFPCFDG---------------SFHPFIR---------------ASYF------------ 153

  Fly   329 GPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKR--- 390
             ||:::|            :|.||       .:.|.|:..|                 ||:|   
Zfish   154 -PASSSA------------VPIPG-------TFAWPLTARG-----------------KPRRGML 181

  Fly   391 IRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGE 455
            .|..||..|...||..|:..:|:...:||.||..|.|.::|||:||||||.|. |..:|.|....
Zfish   182 RRAVFSDVQRKALEKMFQKQKYISKPDRKKLATKLGLKDSQVKIWFQNRRMKW-RNSKERELLSS 245

  Fly   456 GGSQR----NMHNGSGDEDD------DELIDMEMDE---CPSDEEHELDA 492
            ||.:.    ...|.:.|..|      .|.:..|...   |.|..:||.:|
Zfish   246 GGCREQTLPTKMNPNPDLSDVGKRFEHEAVLRESPRAPFCQSRGDHEFNA 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/58 (43%)
dbx1bNP_571253.1 COG5576 <173..296 CDD:227863 43/141 (30%)
Homeodomain 182..236 CDD:459649 24/54 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..266 6/27 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..322 88/375 (23%)

Return to query results.
Submit another query.