DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and hoxc11a

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_571240.1 Gene:hoxc11a / 30403 ZFINID:ZDB-GENE-990415-111 Length:306 Species:Danio rerio


Alignment Length:63 Identity:24/63 - (38%)
Similarity:41/63 - (65%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 KPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
            :.::.|..:|..|:.:||..|..|.|:...:|..|::.|||::.|||:||||||.|.|::.::
Zfish   233 RTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRD 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 23/55 (42%)
hoxc11aNP_571240.1 DUF3528 42..167 CDD:432284
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..238 0/4 (0%)
Homeodomain 235..291 CDD:459649 23/55 (42%)
Blue background indicates that the domain is not in the aligned region.

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