Protein Alignment ems and hoxc6a

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_571198.1
• Gene: hoxc6a / 30346
• ZFINID: ZDB-GENE-990415-113
• Length: 231
• Species: Danio rerio
• Alignment Length: 226
• Identity: 61/226 - (26%)
• Similarity: 83/226 - (36%)
• Gaps: 62/226 - (27%)

  Fly   275 GG----PPMPQGQPGLPDIKALPPY--------INAPPELPPQHN--------PHLIAAAQFQMA 319
            ||    |.||........::....|        |.|.|...||.|        |:...:..|
Zfish    16 GGQEVLPNMPLNSTTYDSVRHFSSYGTTVTQNRIYASPFYSPQDNVVFGSSRGPYEYGSNVF--- 77

  Fly   320 AALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMAR--------DSYQLYPWL--LSRHGRIFPH 374
              ||...||......:.......|.||.. |...||        ::.|:|||:  ::.|..:
Zfish    78 --LQDKDVLPSCRQTSMGLNAQSHVAQEY-NLEQARAGTQDQKANNIQIYPWMQRMNSHSGV--- 136

  Fly   375 RFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNR 439
             ..||       ..:|.|..:|..|.|:||..|..|:|:....|..:|..|.|:|.|:|:|||||
Zfish   137 -GYGS-------DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 193

  Fly   440 RTKHKR---------------MQQEDEKGGE 455
            |.|.|:               ..||.||..|
Zfish   194 RMKWKKETNLTSTVPGTESAGTPQETEKETE 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
hoxc6a	NP_571198.1	Antp-type hexapeptide	123..128		3/4 (75%)
		Homeodomain	143..199	CDD:459649	24/55 (44%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	200..231		5/25 (20%)