Protein Alignment ems and hoxb8a

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_005171620.1
• Gene: hoxb8a / 30343
• ZFINID: ZDB-GENE-990415-108
• Length: 246
• Species: Danio rerio
• Alignment Length: 274
• Identity: 65/274 - (23%)
• Similarity: 91/274 - (33%)
• Gaps: 84/274 - (30%)

  Fly   240 PNYPKPAMMHPGGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDI-------KALPPYIN 297
            |||.:.......|..|.::             .|||.....|..|.:.:.       .:..||..
Zfish    21 PNYYECGFAQDLGTRPTVV-------------YGPGTGATFQHAPQIQEFYHHGASTLSAAPYQQ 72

  Fly   298 APPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAA----------AAAAAGLPPHAAQFMPNPG 352
            :|..:.....|     ..|....|||...:.|...|          |....|......:..|:|
Zfish    73 SPCAVTCHGEP-----GNFYGYDALQRQTLFGAQDADLVQYSDCKLATGGIGDETDNTEQSPSP- 131

  Fly   353 MARDSYQLYPWLLSR--HGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVG 415
                 .||:||:..:  .||                  :|.|..:|..|.|:||..|..|.|:..
Zfish   132 -----TQLFPWMRPQVAAGR------------------RRGRQTYSRYQTLELEKEFLFNPYLTR 173

  Fly   416 AERKALAQNLNLSETQVKVWFQNRRTKHKRMQQED-----------------EKGGEGGSQRNMH 463
            ..|..::..|.|:|.|||:||||||.|.|:...:|                 ||....|:|
Zfish   174 KRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKSEQEQIEKEKREKEQASGTQ---- 234

  Fly   464 NGSGDEDDDELIDM 477
              |..||.|:...|
Zfish   235 --SAGEDCDKAKQM 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
hoxb8a	XP_005171620.1	Homeodomain	147..203	CDD:459649	24/55 (44%)