Protein Alignment ems and hoxb3a

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_571192.2
• Gene: hoxb3a / 30339
• ZFINID: ZDB-GENE-990415-104
• Length: 417
• Species: Danio rerio
• Alignment Length: 236
• Identity: 68/236 - (28%)
• Similarity: 103/236 - (43%)
• Gaps: 49/236 - (20%)

  Fly   272 MGPGGPPMPQ--------GQPGLPDIKALPPYINAPPEL-PPQHNPHLIAAAQFQMAAALQAGHV 327
            :|...||.||        |....|   :|||..:.||:: |||:..::.|....|.......|.|
Zfish    53 LGTSAPPQPQHAKTKELNGSCMRP---SLPPEHHPPPQVSPPQNTVNVAATNATQQPGGSGGGGV 114

  Fly   328 LGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLL-SRHGRIFPHRFP-----------GSF 380
            .|....:.:::    .::....||.:.:   |::||:. ||......:..|           |..
Zfish   115 AGSGGTSKSSS----KSSSMATNPTLTK---QIFPWMKESRQNTKQKNSSPSASSANAESSGGEK 172

  Fly   381 LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKR 445
            ..|.....||.|||::.:||::||..|..|:|:....|..:|..|||||.|:|:||||||.|:|:
Zfish   173 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 237

  Fly   446 MQQE----DEKGG-------------EGGSQRNMHN-GSGD 468
            .|:.    ...||             ..|...:||: ||.|
Zfish   238 DQKSKGIGSSSGGPSPTGSPPLPMQSSAGFMNSMHSMGSYD 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	28/55 (51%)
hoxb3a	NP_571192.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	51..135		21/88 (24%)
		Antp-type hexapeptide	140..145		2/4 (50%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	147..184		7/36 (19%)
		Homeodomain	181..237	CDD:459649	28/55 (51%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	237..290		9/42 (21%)
		DUF4074	353..415	CDD:463833
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	381..417