Protein Alignment ems and hoxb1a

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_571190.2
• Gene: hoxb1a / 30337
• ZFINID: ZDB-GENE-990415-101
• Length: 316
• Species: Danio rerio
• Alignment Length: 198
• Identity: 52/198 - (26%)
• Similarity: 77/198 - (38%)
• Gaps: 43/198 - (21%)

  Fly   298 APPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYP 362
            |.|..|.||  |.......|.|      :..|..|..:|:.|......|  |.||      :.:.
Zfish   152 AVPAAPYQH--HGCEGQDHQRA------YSQGTYADLSASQGTEKDTDQ--PPPG------KTFD 200

  Fly   363 WLLSRHGRIFPHRFPGSFLVPP---------FRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAER 418
            |:..:..             ||         ......|||.|:..||.:||..|..::|:..|.|
Zfish   201 WMKVKRN-------------PPKTGKVAEYGLGPQNTIRTNFTTKQLTELEKEFHFSKYLTRARR 252

  Fly   419 KALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMHNGSGDEDDDELIDMEMDECP 483
            ..:|..|.|:|||||:||||||.|.|:.::|........|.:::     ::..|.......:..|
Zfish   253 VEIAATLELNETQVKIWFQNRRMKQKKREKEGLAPASSTSSKDL-----EDQSDHSTSTSPEASP 312

  Fly   484 SDE 486
            |.:
Zfish   313 SPD 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	27/55 (49%)
hoxb1a	NP_571190.2	Homeodomain	226..279	CDD:459649	26/52 (50%)