DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Nkx2-8

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001100202.1 Gene:Nkx2-8 / 299061 RGDID:1310629 Length:234 Species:Rattus norvegicus


Alignment Length:69 Identity:31/69 - (44%)
Similarity:41/69 - (59%) Gaps:4/69 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 PGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRT 441
            |||    ...|.::.|..||.:|.|:||..|...:|:...||:.||:.|.|:.||||:||||.|.
  Rat    74 PGS----DAEKRRKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHRY 134

  Fly   442 KHKR 445
            |.||
  Rat   135 KLKR 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/55 (45%)
Nkx2-8NP_001100202.1 Homeodomain 82..138 CDD:459649 25/55 (45%)

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