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Protein Alignment ems and Nkx1-2
DIOPT Version :9
Sequence 1: | NP_731868.1 |
Gene: | ems / 41697 |
FlyBaseID: | FBgn0000576 |
Length: | 494 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001163947.1 |
Gene: | Nkx1-2 / 293568 |
RGDID: | 1306744 |
Length: | 305 |
Species: | Rattus norvegicus |
Alignment Length: | 157 |
Identity: | 55/157 - (35%) |
Similarity: | 71/157 - (45%) |
Gaps: | 41/157 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 313 AAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMP-NPGMARDSYQLYPWLLSRHGRIFPHRF 376
|.:.|.....|..|. |...|.|.|.|.....|..:| :||.
Rat 98 AGRAQRPERWQGAHA-GSLEAGAVAVGTEESGADGLPASPGS----------------------- 138
Fly 377 PGSFLVP-PFR--------KPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQV 432
||| | |.| ||:|.||||:..||:.||:.|.:.:|:...||..||.:|:|:||||
Rat 139 PGS---PRPRRRRAESSCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQV 200
Fly 433 KVWFQNRRTKHKRMQQEDEKGGEGGSQ 459
|:||||||||.|: ...|.:|..|
Rat 201 KIWFQNRRTKWKK----QNPGADGAVQ 223
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR24340 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 3.010 |
|
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