Protein Alignment ems and Nkx1-2

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001163947.1
• Gene: Nkx1-2 / 293568
• RGDID: 1306744
• Length: 305
• Species: Rattus norvegicus
• Alignment Length: 157
• Identity: 55/157 - (35%)
• Similarity: 71/157 - (45%)
• Gaps: 41/157 - (26%)

  Fly   313 AAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMP-NPGMARDSYQLYPWLLSRHGRIFPHRF 376
            |.:.|.....|..|. |...|.|.|.|.....|..:| :||.
  Rat    98 AGRAQRPERWQGAHA-GSLEAGAVAVGTEESGADGLPASPGS----------------------- 138

  Fly   377 PGSFLVP-PFR--------KPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQV 432
            |||   | |.|        ||:|.||||:..||:.||:.|.:.:|:...||..||.:|:|:||||
  Rat   139 PGS---PRPRRRRAESSCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQV 200

  Fly   433 KVWFQNRRTKHKRMQQEDEKGGEGGSQ 459
            |:||||||||.|:    ...|.:|..|
  Rat   201 KIWFQNRRTKWKK----QNPGADGAVQ 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	30/55 (55%)
Nkx1-2	NP_001163947.1	Homeodomain	157..213	CDD:459649	30/55 (55%)