Protein Alignment ems and Hmx2

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001099773.1
• Gene: Hmx2 / 293538
• RGDID: 1565366
• Length: 273
• Species: Rattus norvegicus
• Alignment Length: 275
• Identity: 69/275 - (25%)
• Similarity: 92/275 - (33%)
• Gaps: 110/275 - (40%)

  Fly   183 PAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPS---SSPTLLISSPHATPPQQQQQQPPPNYPK 244
            |:....|.|..||::      ...|||.:..:|.   .:|......||.  |::...:..|..|.
  Rat    30 PSEAPREPAGWPARK------RSLSVSSEEEEPEEGWKAPACYCPDPHG--PKEPSPKHHPPIPF 86

  Fly   245 PAMMHPGGAGPMMMPGMPPAGLVR-PFPMGPGGPP--------MPQGQPGLPDIKALPPYINAPP 300
            |.:..|.|:|     |..||...| || :.|..|.        :|.|.|            :..|
  Rat    87 PCLGTPKGSG-----GAGPAASERTPF-LSPSHPDFKEEKERLLPAGSP------------SPGP 133

  Fly   301 ELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLL 365
            |.|..                       |.|...|.||
  Rat   134 ERPRD-----------------------GGAERQAGAA--------------------------- 148

  Fly   366 SRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSET 430
                                  .|:.||.||.||:.:||..|:..:|:..:||..||.:|.|:||
  Rat   149 ----------------------KKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTET 191

  Fly   431 QVKVWFQNRRTKHKR 445
            |||.||||||.|.||
  Rat   192 QVKTWFQNRRNKWKR 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	29/55 (53%)
Hmx2	NP_001099773.1	Homeodomain	150..206	CDD:459649	29/55 (53%)