DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Dlx3

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001099302.1 Gene:Dlx3 / 287638 RGDID:1304875 Length:287 Species:Rattus norvegicus


Alignment Length:81 Identity:34/81 - (41%)
Similarity:49/81 - (60%) Gaps:7/81 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 KPKRI---RTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ 448
            |||::   ||.:|..||..|:..|:..||:...||..||..|.|::||||:||||||:|.|::. 
  Rat   125 KPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLY- 188

  Fly   449 EDEKGGEGGSQRNMHN 464
               |.||...:.:.:|
  Rat   189 ---KNGEVPLEHSPNN 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 27/58 (47%)
Dlx3NP_001099302.1 DLL_N 27..107 CDD:463567
COG5576 <109..230 CDD:227863 34/81 (42%)
Homeodomain 130..186 CDD:459649 26/55 (47%)
Blue background indicates that the domain is not in the aligned region.

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