DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and GBX1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001092304.1 Gene:GBX1 / 2636 HGNCID:4185 Length:363 Species:Homo sapiens


Alignment Length:320 Identity:81/320 - (25%)
Similarity:110/320 - (34%) Gaps:114/320 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 PPPNYPKPA-MMHPGGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDI------------ 289
            |||  |:.. :::.|  .||.||..|   ||.|..:.|.  |:|.|.|.|..:            
Human    33 PPP--PRSGHLLYTG--YPMFMPYRP---LVLPQALAPA--PLPAGLPPLAPLASFAGRLTNTFC 88

  Fly   290 ----KALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPN 350
                :|:|..:.....||....|........::|||        .|||||.||...|......|.
Human    89 AGLGQAVPSMVALTTALPSFAEPPDAFYGPQELAAA--------AAAAAATAARNNPEPGGRRPE 145

  Fly   351 PGMARDSY-------------------QLYPWLLSRHGRIFPH---------------------- 374
            .|:..|..                   :.:| .|...|:::..                      
Human   146 GGLEADELLPAREKVAEPPPPPPPHFSETFP-SLPAEGKVYSSDEEKLEASAGDPAGSEQEEEGS 209

  Fly   375 --------------RFPGSFLVP------------------------PFRKPKRIRTAFSPSQLL 401
                          ..||:.|.|                        |..|.:|.||||:..|||
Human   210 GGDSEDDGFLDSSAGGPGALLGPKPKLKGSLGTGAEEGAPVTAGVTAPGGKSRRRRTAFTSEQLL 274

  Fly   402 KLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRN 461
            :||..|...:|:...||..:|..|.|||.|||:||||||.|.||::..:.....|...||
Human   275 ELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIKAGNVSSRSGEPVRN 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 29/55 (53%)
GBX1NP_001092304.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..265 19/137 (14%)
Homeodomain 262..318 CDD:459649 29/55 (53%)
Blue background indicates that the domain is not in the aligned region.

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