DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and gbx2

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_694496.1 Gene:gbx2 / 245948 ZFINID:ZDB-GENE-020509-2 Length:342 Species:Danio rerio


Alignment Length:467 Identity:105/467 - (22%)
Similarity:137/467 - (29%) Gaps:182/467 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VMMPTPKQKIG----FSIESIVGNDVSTAGGNSTPDLSGPQSPPPGERNVPGSPPQTPPATLTLI 75
            :||..|   :|    |||:|::|               ||..|.||.....|.|...|..::.|.
Zfish    10 MMMQRP---VGSTTAFSIDSLIG---------------GPPQPSPGHFVYTGYPMFMPYRSVVLP 56

  Fly    76 PGSPPHHLMAPPA---HGLPYPHPHAQQQHLQAPHPHPHL------SPAQQHVLHQHLLMQQQHP 131
            |..||    .||.   ..||..|||         ||.|.|      |.||...|...|:...  |
Zfish    57 PPPPP----PPPTLPQSALPTTHPH---------HPIPGLPSSFCSSLAQGMALTSTLMATL--P 106

  Fly   132 G----TP-KSHQDIQELL--QRLHHNAAMASGLSPLQTRLSPETEQPQMAVSLKRERSPAPPAME 189
            |    :| :.|||....|  |.:|   ||......:  ||..|..:     :...:.|.:.|:..
Zfish   107 GGFSSSPSQQHQDAARKLGSQSIH---AMFDKSQDI--RLDGEDGK-----TFATKDSTSIPSFH 161

  Fly   190 QAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAG 254
            .:       |..||  .:|...|...|............:...........|.|..||.....  
Zfish   162 DS-------QSVHT--STVRGHSKDDSKEDDCHRKDESFSMDSDLDYSSDDNGPGNAMCQKED-- 215

  Fly   255 PMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMA 319
                              |.|...:..|..|                                  
Zfish   216 ------------------GDGSGGLDDGVHG---------------------------------- 228

  Fly   320 AALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPP 384
                     |..|....:.|                                             
Zfish   229 ---------GNGAGNTTSTG--------------------------------------------- 239

  Fly   385 FRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQE 449
              |.:|.||||:..|||:||..|...:|:...||..:|..|.|||.|||:||||||.|.||::..
Zfish   240 --KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAG 302

  Fly   450 DEKGGEGGSQRN 461
            :.....|...||
Zfish   303 NVNSKTGEPSRN 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 29/55 (53%)
gbx2NP_694496.1 Homeodomain 242..298 CDD:459649 29/55 (53%)

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