DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Bsx

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_839976.1 Gene:Bsx / 244813 MGIID:2669849 Length:232 Species:Mus musculus


Alignment Length:203 Identity:66/203 - (32%)
Similarity:87/203 - (42%) Gaps:49/203 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 ELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLL 365
            |:.|.|    .|::.......|..|:.|.|....     |.|||    .:|....|.:  :|:.|
Mouse    35 EVAPDH----FASSLASRVPLLDYGYPLMPTPTL-----LTPHA----HHPLHKGDHH--HPYFL 84

  Fly   366 SRHG----RIFPH----RFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALA 422
            :..|    .:|||    ..||...     :.::.||.||.|||..||..||..:|:...||..||
Mouse    85 TTSGMPVPALFPHPQHAELPGKHC-----RRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELA 144

  Fly   423 QNLNLSETQVKVWFQNRRTKHK---RMQQEDEKGGEG-----GSQRNMHNGSGD----------- 468
            ..|:|||||||.||||||.|||   |..|::.|..:|     ||.|.......|           
Mouse   145 TALSLSETQVKTWFQNRRMKHKKQLRKSQDEPKAADGPESPEGSPRAPEGAPADARLSLPAGAFV 209

  Fly   469 --EDDDEL 474
              |.:||:
Mouse   210 LTEPEDEV 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 33/58 (57%)
BsxNP_839976.1 Homeodomain 111..167 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..232 17/58 (29%)

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