DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Alx1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001408403.1 Gene:Alx1 / 216285 MGIID:104621 Length:377 Species:Mus musculus


Alignment Length:62 Identity:25/62 - (40%)
Similarity:37/62 - (59%) Gaps:0/62 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 KPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ 448
            |.:|.||.|:..||.:||..|:...|.....|:.||....|:|.:|:|||||||.|.::.::
Mouse   131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRER 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 24/55 (44%)
Alx1NP_001408403.1 Homeodomain 133..189 CDD:459649 24/55 (44%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:Q63087 192..326 0/1 (0%)
OAR 302..320 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319
Blue background indicates that the domain is not in the aligned region.

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