DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Nkx1-2

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_033149.1 Gene:Nkx1-2 / 20231 MGIID:104806 Length:305 Species:Mus musculus


Alignment Length:141 Identity:51/141 - (36%)
Similarity:67/141 - (47%) Gaps:40/141 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 GPAAAAAAAAGLPPHAAQFMP-NPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVP-PFR----- 386
            |...|.|.|.|.....|:.:| :||.                       |||   | |.|     
Mouse   113 GSPEARAVAVGTEESGAEGLPASPGS-----------------------PGS---PRPRRRRAES 151

  Fly   387 ---KPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ 448
               ||:|.||||:..||:.||:.|.:.:|:...||..||.:|:|:|||||:||||||||.|:   
Mouse   152 SCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK--- 213

  Fly   449 EDEKGGEGGSQ 459
             ...|.:|..|
Mouse   214 -QNPGADGAVQ 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 30/55 (55%)
Nkx1-2NP_033149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..158 17/70 (24%)
Homeodomain 157..213 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..257 5/18 (28%)

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