DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Pitx1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_035227.1 Gene:Pitx1 / 18740 MGIID:107374 Length:315 Species:Mus musculus


Alignment Length:190 Identity:51/190 - (26%)
Similarity:77/190 - (40%) Gaps:63/190 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 IKALPPYINAPPELPPQHNP----HLIAAAQ----FQMAAA----------LQAGHVLGPAAAAA 335
            ::.||..:..||  ||.|:.    ||..||.    .:.:|:          .:.|...||....|
Mouse    10 LERLPEGLRPPP--PPPHDMGPSFHLARAADPREPLENSASESSDADLPDKERGGEAKGPEDGGA 72

  Fly   336 AAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPK--RIRTAFSPS 398
            .:||.          .|.|.|                           |.:|.|  |.||.|:..
Mouse    73 GSAGC----------GGGAED---------------------------PAKKKKQRRQRTHFTSQ 100

  Fly   399 QLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDE----KGG 454
            ||.:||..|:.|:|...:.|:.:|...||:|.:|:|||:|||.|.::.::..:    |||
Mouse   101 QLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKGG 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 25/57 (44%)
Pitx1NP_035227.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..104 30/132 (23%)
Homeodomain 91..147 CDD:459649 24/55 (44%)
Interaction with PIT-1 151..280 3/10 (30%)
OAR 277..294 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 281..294
Nuclear localization signal. /evidence=ECO:0000255 287..291
Blue background indicates that the domain is not in the aligned region.

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