DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and tab-1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_495392.1 Gene:tab-1 / 185156 WormBaseID:WBGene00006380 Length:197 Species:Caenorhabditis elegans


Alignment Length:135 Identity:46/135 - (34%)
Similarity:67/135 - (49%) Gaps:32/135 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 WLLS-----RHGRIFPHR---FPG----------SFLVPPFRK------PKRIRTAFSPSQLLKL 403
            ||.:     .|..:...|   |||          |.....:|:      .::.||.||..||..|
 Worm    71 WLAAAAFPIEHSLLLAQRNGVFPGFWSTADQIRLSNATKAYRRLRLECSRRKARTVFSDQQLQGL 135

  Fly   404 EHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMHNGSGD 468
            |..|||.:|:...||..||..|||||||||.||||||.|||::.::|:        .::.:.:|:
 Worm   136 ERRFESQRYLSTPERIELANALNLSETQVKTWFQNRRMKHKKVVRKDD--------NSVDDDNGN 192

  Fly   469 EDDDE 473
            :::.|
 Worm   193 DNESE 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 33/55 (60%)
tab-1NP_495392.1 Homeodomain 121..177 CDD:459649 33/55 (60%)

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