Protein Alignment ems and vab-15

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_509648.1
• Gene: vab-15 / 181197
• WormBaseID: WBGene00006881
• Length: 225
• Species: Caenorhabditis elegans
• Alignment Length: 257
• Identity: 72/257 - (28%)
• Similarity: 106/257 - (41%)
• Gaps: 81/257 - (31%)

  Fly   211 QSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPFPMGPG 275
            :..:|..|....:.|...||.|:.::    :.|||..:.|  ..||::||:.|
 Worm     4 KDEKPKQSGLFSVESLLETPKQKCRE----DLPKPTPITP--KTPMLIPGLHP------------ 50

  Fly   276 GPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVL-------GPAAA 333
                            :.||..|      |.:|.:|..|        |.|:.|       .|.:.
 Worm    51 ----------------MTPYFGA------QLDPVMIYFA--------QTGNRLPIVSSDSSPESC 85

  Fly   334 AAAAAGLPPHAAQFM-------PNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRI 391
            |::...: .|:.|::       |....|:....|...:|.:|..              .|||
 Worm    86 ASSPLSM-QHSLQWLSSQREDSPTSDDAKIQIGLSKCMLRKHKN--------------NRKP--- 132

  Fly   392 RTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ-EDEK 452
            ||.||..||:.||..|:|.||:..|||...:.:|.|:|||||:||||||.|.||:|: |.||
 Worm   133 RTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKIWFQNRRAKSKRLQEAEVEK 194

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	29/55 (53%)
vab-15	NP_509648.1	Homeodomain	130..186	CDD:459649	32/58 (55%)