DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and mls-2

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_508815.2 Gene:mls-2 / 180751 WormBaseID:WBGene00003377 Length:341 Species:Caenorhabditis elegans


Alignment Length:69 Identity:36/69 - (52%)
Similarity:46/69 - (66%) Gaps:0/69 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 PPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQ 447
            |...:.|:.||.||.||:.:||..||..:|:...||..|||.|:|:|||||:||||||.|.||..
 Worm   196 PSQNRKKKTRTVFSRSQVSQLEMMFECKRYLSSQERSNLAQKLHLTETQVKIWFQNRRNKFKRQA 260

  Fly   448 QEDE 451
            |.|:
 Worm   261 QTDD 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 31/55 (56%)
mls-2NP_508815.2 Homeodomain 202..258 CDD:459649 31/55 (56%)

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