DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and ceh-51

DIOPT Version :9

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_507685.1 Gene:ceh-51 / 180233 WormBaseID:WBGene00013583 Length:234 Species:Caenorhabditis elegans


Alignment Length:296 Identity:63/296 - (21%)
Similarity:91/296 - (30%) Gaps:121/296 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 SVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPFP 271
            :|...|:.|||||..:.|||          ..|..|..|:                         
 Worm    32 TVMEYSTMPSSSPGSMSSSP----------AYPAAYQAPS------------------------- 61

  Fly   272 MGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAA 336
                                 |.|:..|.:|            .:|...|.....:|..|.|.|.
 Worm    62 ---------------------PCYVADPNQL------------YYQQQLAHNGNDMLVQAHAQAY 93

  Fly   337 AAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFP-------GSFLVP----------- 383
            .|                    |.:.|...::.::.|..||       ..|:.|           
 Worm    94 QA--------------------QCFAWFQQQYSQLSPSSFPHPMVAHHAGFIPPPPSFLHHQHQQ 138

  Fly   384 ----PFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRR---- 440
                |..|.:..||.||.|||..|...||....:...||:.|...:.||..|:|:||||||    
 Worm   139 HPRAPSEKRRGARTPFSDSQLYALRTRFEQCDTIKVDERRKLGAVIGLSPEQIKIWFQNRRFKLR 203

  Fly   441 -TKHKRMQQEDEKGGEGGSQRNMHNGSGDEDDDELI 475
             .|:|:::|      :...|:.......:||...:|
 Worm   204 KEKYKQIKQ------DAVQQQKSAKEEAEEDQKHVI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeobox 392..444 CDD:278475 24/56 (43%)
ceh-51NP_507685.1 Homeobox 151..204 CDD:365835 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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