DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and unc-30

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001021277.1 Gene:unc-30 / 178265 WormBaseID:WBGene00006766 Length:323 Species:Caenorhabditis elegans


Alignment Length:105 Identity:36/105 - (34%)
Similarity:55/105 - (52%) Gaps:19/105 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTK-HKRMQQE 449
            :||:|.||.|:..||.:||:.|..|:|...|.|:.:|..::|:|.:|:|||:|||.| .||.:..
 Worm   110 QKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKNRRAKWRKRERNY 174

  Fly   450 DEKGGEG------------GSQRN------MHNGSGDEDD 471
            ....|:|            ||.:|      :.:.|...||
 Worm   175 VIDNGQGTTKVTAQSLDPLGSLQNTFPQTLLQSSSSQLDD 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 24/56 (43%)
unc-30NP_001021277.1 Homeodomain 113..169 CDD:459649 24/55 (44%)

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